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  • Deciphering the transcriptional cis-regulatory code
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Elling U, Taubenschmid J, Wirnsberger G, O’Malley R, Demers S, Vanhaelen Q, Shukalyuk A, Schmauss G, Schramek D, Schnuetgen F, von Melchner H, Ecker J, Stanford WS, Zuber J, Stark A, Penninger JM. [Forward and reverse mouse genetics through derivation of haploid embryonic stem cells. Cell Stem Cell. In Press.

  • Genome sequencing

    WT mouse strain 129 (raw reads [fastq])
    WT mouse strain 129 (mapped reads [botwtie output]
    WT mouse strain B6 (raw reads [fastq])
    WT mouse strain B6 (mapped reads [botwtie output])
    WT mouse strain B6 vs 129 (coverage [BW])
    haploid ES-cell-line HMSc1 (raw reads [fastq])
    haploid ES-cell-line HMSc1 (mapped reads [botwtie output])
    haploid ES-cell-line HMSc1 vs WT mouse strains B6 and 129 (coverage [BW])
    haploid ES-cell-line HMSc1 vs WT mouse strain B6 (coverage [BW])
    haploid ES-cell-line HMSc1 vs WT mouse strain 129 (coverage [BW])
    haploid ES-cell-line HMSc2 (raw reads [fastq])
    haploid ES-cell-line HMSc2 (mapped reads [botwtie output])
    haploid ES-cell-line HMSc2 vs WT mouse strains B6 and 129 (coverage [BW])
    haploid ES-cell-line HMSc2 vs WT mouse strain B6 (coverage [BW])
    haploid ES-cell-line HMSc2 vs WT mouse strain 129 (coverage [BW])

  • Virus targeting (no selection)

    Raw reads [fastq]

  • Ricin screen

    Raw reads [fastq] Virus insertion sites in top genes [BED]

IMP logo     Stark Lab
Research Institute of Molecular Pathology
Campus-Vienna-Biocenter 1
1030 Vienna, Austria
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